Protein ZmGBP17 | |
---|---|
Information | |
TF Name: | ZmGBP17 |
Species: | Maize |
TF Family: | GeBP |
Gene Name(Synonym): | GBPTF17 |
Uniprot ID: | B4FYA8 |
Subgenome: | 1 |
ZmGBP17 is a protein in the GeBP family.
Overview of domains present in v5 transcripts | |
---|---|
PF04504 | |
Zm00001eb256290_T003 | |
Zm00001eb256290_T001 | |
Zm00001eb256290_T002 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d018208 | DAPseq | sequence | fimo | position | |
Zm00001d018208 | DAPseq | sequence | fimo | position | |
Zm00001d018208 | ChIPseq | sequence | fimo | position | |
Zm00001d018208 | PChIPseq | sequence | fimo | position |
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF04504 |
|
Hover here to show all domains |
ATATAAAAAAATGAACAAAACCGCG...
ATATAAAAAAATGAACAAAACCGCGACGCCGCGAAAACCCTAGCTTGGTGCCGCCTCACCAGCTTGCCAAATCTCTAACCCTAGGTGCAGCGGCGGAGATGGCCCCCAAGCGCTCGGCTCCACCTCCGCCGCCTCCGCCCCCGGCTGCCTCCTCCGAGGAGACCGCCTCTGGTTCGGGCTCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATTTGGAGACCGCCCACTCACCGCCTCCCGTCGCTCCCAAGAGCGTTGCTCCGCTGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGACGAGGATGAGTATGACGATGAAGATGACGAGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGATGAGGATGAAGACGACGAAGAGGAGGATATCGAAGAGGACGAGAAGGCCAACCACGTGGTCCCTTCTTCCGCCACCAAGAACCCGCCTCCGCCGCCGCAGACTGGCGAGGATTCCGAGGCTTCCGACGAAGAAGAGGATAGGGAGGCGGACGACGAGATGCCGCAGACGAAGCCCGCTCCAAATCAAGAGGTGGAGGCTAAGGGTGCAAAGCGGCCGAGCGCGCCGTTCCAGCGCACCTGGTCGATTGACGACGACTTCCGCATCCTGGAGGCCCTCGCTGCGCAACGCCTGGAGCACGGCGCGCTGCCTCAAACGGACGTGCTGGCCGACGCCCTCGCTGGCAAGCTCGACAATAGTGGCTGCAGCCTCTCCGATCTCAAGAGGAAGGTGAGGAGTTTGCAGAGCCGGTACGCCAAAGCGGTCAAGAAAGGCGCGCCACCGAGCAAGGATCAGGATCGCCGTCTCTTCGACCTCTGCAAGAACGTCTGGCCTTCTGTTAGCAATGCCAAGCCTGTTACCAAGGCGGTTACCAAGGCGTCGGCTAACGGTGGTGCTGGGAGGGAGCCTGACGAGATGTGTGAGCTGTACCCATACCTTGCGGAGGAGGTGAGGGCGCTTCAGAGGGCACACCCAGGCTTGTTCAAGCGGGAGTTTGGGATGATCGAAGACAGCAAGGCCCGTACACTGGACGAGAGGATCAAGAAGCAGAGGCGTGCACTGATGAACCTACATCTTCGTCGCCACGACCTGACCAAGGAAGTGACCAGGACGCTCATGGACCTGGCTGAGTGATGCAGTGGACTGAGCTGAGTATCATCTAAGAATTCTATTTTATGGTATTTAAGTGCACTGATGATCGATTACCAGCAAATGTTGTATGACCTACTCAAGCATGGTAGGTGAATCTTGATTTTGTTATCTATCTGGTGTCGAGTTTTTAGTTGTTCATGGTGTCAGACATGTTGCAGCGTCAGTGTTAAGTCAGGAAGTGCCTGAGTATGCACCTGTTCAGTTATTATGTTTTGATATGGTTTCTCAATTTCTTAGGA
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
ATATAAAAAAATGAACAAAACCGCG...
ATATAAAAAAATGAACAAAACCGCGACGCCGCGAAAACCCTAGCTTGGTGCCGCCTCACCAGCTTGCCAAATCTCTAACCCTAGGTGCAGCGGCGGAGATGGCCCCCAAGCGCTCGGCTCCACCTCCGCCGCCTCCGCCCCCGGCTGCCTCCTCCGAGGAGACCGCCTCTGGTTCGGGCTCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATTTGGAGACCGCCCACTCACCGCCTCCCGTCGCTCCCAAGAGCGTTGCTCCGCTGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGACGAGGATGAGTATGACGATGAAGATGACGAGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGATGAGGATGAAGACGACGAAGAGGAGGATATCGAAGAGGACGAGAAGGCCAACCACGTGGTCCCTTCTTCCGCCACCAAGAACCCGCCTCCGCCGCCGCAGACTGGCGAGGATTCCGAGGCTTCCGACGAAGAAGAGGATAGGGAGGCGGACGACGAGATGCCGCAGACGAAGCCCGCTCCAAATCAAGAGGTGGAGGCTAAGGGTGCAAAGCGGCCGAGCGCGCCGTTCCAGCGCACCTGGTCGATTGACGACGACTTCCGCATCCTGGAGGCCCTCGCTGCGCAACGCCTGGAGCACGGCGCGCTGCCTCAAACGGACGTGCTGGCCGACGCCCTCGCTGGCAAGCTCGACAATAGTGGCTGCAGCCTCTCCGATCTCAAGAGGAAGGTGAGGAGTTTGCAGAGCCGGTACGCCAAAGCGGTCAAGAAAGGCGCGCCACCGAGCAAGGATCAGGATCGCCGTCTCTTCGACCTCTGCAAGAACGTCTGGCCTTCTGTTAGCAATGCCAAGCCTGTTACCAAGGCGGTTACCAAGGCGTCGGCTAACGGTGGTGCTGGGAGGGAGCCTGACGAGATGTGTGAGCTGTACCCATACCTTGCGGAGGAGGTGAGGGCGCTTCAGAGGGCACACCCAGGCTTGTTCAAGCGGGAGTTTGGGATGATCGAAGACAGCAAGGCCCGTACACTGGACGAGAGGATCAAGAAGCAGAGGCGTGCACTGATGAACCTACATCTTCGTCGCCACGACCTGACCAAGGAAGTGACCAGGACGCTCATGGACCTGGCTGAGTGATGCAGTGGACTGAGCTGAGTATCATCTAAGAATTCTATTTTATGGTATTTAAGTGCACTGATGATCGATTACCAGCAAATGTTGTATGACCTACTCAAGCATGGTAGGTGAATCTTGATTTTGTTATCTATCTGGTGTCGAGTTTTTAGTTGTTCATGGTGTCAGACATGTTGCAGCGTCAGTGTTAAGTCAGGAAGTGCCTGAGTATGCACCTGTTCAGTTATTATGTTTTGATATGGTTTCTCAATTTCTTAGGATAACTCTGTAGTCTAAATTTGTCAGTCTGAGCTCTAGTAATATGGAAATACTCCCTCCATCCTAAATTATTATAAGTCATTCCTTGAGGAGTCAAAAGTAATTCAAATTTAACCAAATTTATATAATAAAGTAGTAACA
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
ATGGCCCCCAAGCGCTCGGCTCCAC...
ATGGCCCCCAAGCGCTCGGCTCCACCTCCGCCGCCTCCGCCCCCGGCTGCCTCCTCCGAGGAGACCGCCTCTGGTTCGGGCTCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATTTGGAGACCGCCCACTCACCGCCTCCCGTCGCTCCCAAGAGCGTTGCTCCGCTGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGACGAGGATGAGTATGACGATGAAGATGACGAGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGATGAGGATGAAGACGACGAAGAGGAGGATATCGAAGAGGACGAGAAGGCCAACCACGTGGTCCCTTCTTCCGCCACCAAGAACCCGCCTCCGCCGCCGCAGACTGGCGAGGATTCCGAGGCTTCCGACGAAGAAGAGGATAGGGAGGCGGACGACGAGATGCCGCAGACGAAGCCCGCTCCAAATCAAGAGGTGGAGGCTAAGGGTGCAAAGCGGCCGAGCGCGCCGTTCCAGCGCACCTGGTCGATTGACGACGACTTCCGCATCCTGGAGGCCCTCGCTGCGCAACGCCTGGAGCACGGCGCGCTGCCTCAAACGGACGTGCTGGCCGACGCCCTCGCTGGCAAGCTCGACAATAGTGGCTGCAGCCTCTCCGATCTCAAGAGGAAGGTGAGGAGTTTGCAGAGCCGGTACGCCAAAGCGGTCAAGAAAGGCGCGCCACCGAGCAAGGATCAGGATCGCCGTCTCTTCGACCTCTGCAAGAACGTCTGGCCTTCTGTTAGCAATGCCAAGCCTGTTACCAAGGCGGTTACCAAGGCGTCGGCTAACGGTGGTGCTGGGAGGGAGCCTGACGAGATGTGTGAGCTGTACCCATACCTTGCGGAGGAGGTGAGGGCGCTTCAGAGGGCACACCCAGGCTTGTTCAAGCGGGAGTTTGGGATGATCGAAGACAGCAAGGCCCGTACACTGGACGAGAGGATCAAGAAGCAGAGGCGTGCACTGATGAACCTACATCTTCGTCGCCACGACCTGACCAAGGAAGTGACCAGGACGCTCATGGACCTGGCTGAGTGA
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE
ATATAAAAAAATGAACAAAACCGCG...
ATATAAAAAAATGAACAAAACCGCGACGCCGCGAAAACCCTAGCTTGGTGCCGCCTCACCAGCTTGCCAAATCTCTAACCCTAGGTGCAGCGGCGGAGATGGCCCCCAAGCGCTCGGCTCCACCTCCGCCGCCTCCGCCCCCGGCTGCCTCCTCCGAGGAGACCGCCTCTGGTTCGGGCTCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATTTGGAGACCGCCCACTCACCGCCTCCCGTCGCTCCCAAGAGCGTTGCTCCGCTGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGACGAGGATGAGTATGACGATGAAGATGACGAGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGATGAGGATGAAGACGACGAAGAGGAGGATATCGAAGAGGACGAGAAGGCCAACCACGTGGTCCCTTCTTCCGCCACCAAGAACCCGCCTCCGCCGCCGCAGACTGGCGAGGATTCCGAGGCTTCCGACGAAGAAGAGGATAGGGAGGCGGACGACGAGATGCCGCAGACGAAGCCCGCTCCAAATCAAGAGGTGGAGGCTAAGGGTGCAAAGCGGCCGAGCGCGCCGTTCCAGCGCACCTGGTCGATTGACGACGACTTCCGCATCCTGGAGGCCCTCGCTGCGCAACGCCTGGAGCACGGCGCGCTGCCTCAAACGGACGTGCTGGCCGACGCCCTCGCTGGCAAGCTCGACAATAGTGGCTGCAGCCTCTCCGATCTCAAGAGGAAGGTGAGGAGTTTGCAGAGCCGGTACGCCAAAGCGGTCAAGAAAGGCGCGCCACCGAGCAAGGATCAGGATCGCCGTCTCTTCGACCTCTGCAAGAACGTCTGGCCTTCTGTTAGCAATGCCAAGCCTGTTACCAAGGCGGTTACCAAGGCGTCGGCTAACGGTGGTGCTGGGAGGGAGCCTGACGAGATGTGTGAGCTGTACCCATACCTTGCGGAGGAGGTGAGGGCGCTTCAGAGGGCACACCCAGGCTTGTTCAAGCGGGAGTTTGGGATGATCGAAGACAGCAAGGCCCGTACACTGGACGAGAGGATCAAGAAGCAGAGGCGTGCACTGATGAACCTACATCTTCGTCGCCACGACCTGACCAAGGAAGTGACCAGGACGCTCATGGACCTGGCTGAGTGATGCAGTGGACTGAGCTGAGTATCATCTAAGAATTCTATTTTATGGTATTTAAGTGCACTGATGATCGATTACCAGCAAATGTTGTATGACCTACTCAAGCATGATTGCTCATATCAATCTTGAGTATCTATTGTGCTCCCCTGCTCCTGGAGGTTAAAATTCAGTCATGCTATTCACAGAGACCAGTAACTGGATCCAAATGTTTCGTTTGTAGTGTGTGTTTCCAGGTTGTGTTGATACCATTTTATAAGTATCACTATGTTACTTTGAGAATTTGTTCATCTGTTAGTCCTAGTGGTAGTGGAGTCATTCACTTAACATGTCGATAAATTATGGACTCTTGTGTACATCAGGCATGTTGATTAGCTATAAAGTTGTACATGCTT
MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEDDEEED
IEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKGAKRPSAPFQRTWSIDDDFRIL
EALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPSKDQDRRLFDLCKNVWPSVSNA
KPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKARTLDERIKKQRRALMNLHLRRHD
LTKEVTRTLMDLAE
ATATAAAAAAATGAACAAAACCGCG...
ATATAAAAAAATGAACAAAACCGCGACGCCGCGAAAACCCTAGCTTGGTGCCGCCTCACCAGCTTGCCAAATCTCTAACCCTAGGTGCAGCGGCGGAGATGGCCCCCAAGCGCTCGGCTCCACCTCCGCCGCCTCCGCCCCCGGCTGCCTCCTCCGAGGAGACCGCCTCTGGTTCGGGCTCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATTTGGAGACCGCCCACTCACCGCCTCCCGTCGCTCCCAAGAGCGTTGCTCCGCTGCCGCAGAAGGTCCAGGAACCCGAAGCGTCCGATGAGGATGAAGACGACGAAGAGGAGGATATCGAAGAGGACGAGAAGGCCAACCACGTGGTCCCTTCTTCCGCCACCAAGAACCCGCCTCCGCCGCCGCAGACTGGCGAGGATTCCGAGGCTTCCGACGAAGAAGAGGATAGGGAGGCGGACGACGAGATGCCGCAGACGAAGCCCGCTCCAAATCAAGAGGTGGAGGCTAAGGGTGCAAAGCGGCCGAGCGCGCCGTTCCAGCGCACCTGGTCGATTGACGACGACTTCCGCATCCTGGAGGCCCTCGCTGCGCAACGCCTGGAGCACGGCGCGCTGCCTCAAACGGACGTGCTGGCCGACGCCCTCGCTGGCAAGCTCGACAATAGTGGCTGCAGCCTCTCCGATCTCAAGAGGAAGGTGAGGAGTTTGCAGAGCCGGTACGCCAAAGCGGTCAAGAAAGGCGCGCCACCGAGCAAGGATCAGGATCGCCGTCTCTTCGACCTCTGCAAGAACGTCTGGCCTTCTGTTAGCAATGCCAAGCCTGTTACCAAGGCGGTTACCAAGGCGTCGGCTAACGGTGGTGCTGGGAGGGAGCCTGACGAGATGTGTGAGCTGTACCCATACCTTGCGGAGGAGGTGAGGGCGCTTCAGAGGGCACACCCAGGCTTGTTCAAGCGGGAGTTTGGGATGATCGAAGACAGCAAGGCCCGTACACTGGACGAGAGGATCAAGAAGCAGAGGCGTGCACTGATGAACCTACATCTTCGTCGCCACGACCTGACCAAGGAAGTGACCAGGACGCTCATGGACCTGGCTGAGTGATGCAGTGGACTGAGCTGAGTATCATCTAAGAATTCTATTTTATGGTATTTAAGTGCACTGATGATCGATTACCAGCAAATGTTGTATGACCTACTCAAGCATGGTAGGTGAATCTTGATTTTGTTATCTATCTGGTGTCGAGTTTTTAGTTGTTCATGGTGTCAGACATGTTGCAGCGTCAGTGTTAAGTCAGGAAGTGCCTGAGTATGCACCTGTTCAGTTATTATGTTTTGATATGGTTTCTCAATTTCTTAGGA
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