Protein ZmGBP17
ZmGBP17 is a protein in the GeBP family.
Information
TF Name: ZmGBP17
Species: Maize
TF Family: GeBP
Gene Name(Synonym): GBPTF17
Uniprot ID: B4FYA8
Subgenome: 1

Protein ZmGBP17

ZmGBP17 is a protein in the GeBP family.

Overview of domains present in v5 transcripts
PF04504
Zm00001eb256290_T003
Zm00001eb256290_T001
Zm00001eb256290_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d018208DAPseq no logo sequence fimo position
Zm00001d018208DAPseq no logo sequence fimo position
Zm00001d018208ChIPseq no logo sequence fimo position
Zm00001d018208PChIPseq no logo sequence fimo position

Interactions where ZmGBP17 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGBP17 is the target  
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There are 56 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb256290_T003 from maize genome v5

Amino Acid Sequence
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MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04504
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Nucleotide Sequence
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ATATAAAAAAATGAACAAAACCGCG...

GRMZM2G083886_T01 from maize genome v3


Related TFome: pUT3118

Amino Acid Sequence
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MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

Nucleotide Sequence
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ATATAAAAAAATGAACAAAACCGCG...

Zm00001d018208_T001 from maize genome v4

Amino Acid Sequence
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MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

Nucleotide Sequence
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ATGGCCCCCAAGCGCTCGGCTCCAC...

Zm00001eb256290_T001 from maize genome v5

Amino Acid Sequence
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MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEYDDEDD
EPQKVQEPEASDEDEDDEEEDIEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKG
AKRPSAPFQRTWSIDDDFRILEALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPS
KDQDRRLFDLCKNVWPSVSNAKPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKART
LDERIKKQRRALMNLHLRRHDLTKEVTRTLMDLAE

Nucleotide Sequence
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ATATAAAAAAATGAACAAAACCGCG...

Zm00001eb256290_T002 from maize genome v5

Amino Acid Sequence
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MAPKRSAPPPPPPPPAASSEETASGSGSEEEEEEEEEEEEDDLETAHSPPPVAPKSVAPLPQKVQEPEASDEDEDDEEED
IEEDEKANHVVPSSATKNPPPPPQTGEDSEASDEEEDREADDEMPQTKPAPNQEVEAKGAKRPSAPFQRTWSIDDDFRIL
EALAAQRLEHGALPQTDVLADALAGKLDNSGCSLSDLKRKVRSLQSRYAKAVKKGAPPSKDQDRRLFDLCKNVWPSVSNA
KPVTKAVTKASANGGAGREPDEMCELYPYLAEEVRALQRAHPGLFKREFGMIEDSKARTLDERIKKQRRALMNLHLRRHD
LTKEVTRTLMDLAE

Nucleotide Sequence
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ATATAAAAAAATGAACAAAACCGCG...


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